Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.020 Biomarker disease BEFREE We assume that alpha-synuclein oligomerization is involved in the neural cell death and brain atrophy. 29379469 2017
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.080 GeneticVariation disease BEFREE We also observed an interaction effect on brain structure between the BDNF and APOE genotypes: cortical atrophy was associated with harboring the apoliprotein E (APOE) ε4 allele only in BDNF val/met subjects (both in HC and PD groups). 31202861 2019
Entrez Id: 3918
Gene Symbol: LAMC2
LAMC2
0.060 Biomarker disease BEFREE We also analyzed the correlation between baseline CSF biomarkers and cortical atrophy rates. 27693189 2017
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.060 Biomarker disease BEFREE We also analyzed the correlation between baseline CSF biomarkers and cortical atrophy rates. 27693189 2017
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.200 Biomarker disease BEFREE We aimed to explore the association between CSF T-tau and brain atrophy 1 year post-stroke. 28583116 2017
Entrez Id: 2896
Gene Symbol: GRN
GRN
0.180 GeneticVariation disease BEFREE We aimed to determine the regional pattern of brain atrophy associated with the C9ORF72 gene mutation, and to determine which regions best differentiate C9ORF72 from subjects with mutations in tau and progranulin, and from sporadic frontotemporal dementia. 22366795 2012
Entrez Id: 203228
Gene Symbol: C9orf72
C9orf72
0.120 GeneticVariation disease BEFREE We aimed to determine the regional pattern of brain atrophy associated with the C9ORF72 gene mutation, and to determine which regions best differentiate C9ORF72 from subjects with mutations in tau and progranulin, and from sporadic frontotemporal dementia. 22366795 2012
Entrez Id: 5917
Gene Symbol: RARS1
RARS1
0.310 GeneticVariation disease BEFREE Variants in RARS1 impair ArgRS activity and do not only lead to a classic hypomyelination presentation with nystagmus and spasticity, but to a wide spectrum, ranging from severe, early-onset epileptic encephalopathy with brain atrophy to mild disease with relatively preserved myelination. 31814314 2020
Entrez Id: 634
Gene Symbol: CEACAM1
CEACAM1
0.010 Biomarker disease BEFREE Using MRI and Evans blue permeability assays, we observed increased stroke volumes, BBB breakdown and edema formation, reduction of cerebral perfusion, and brain atrophy in Ceacam1(-/-) mice. 23780386 2013
Entrez Id: 2192
Gene Symbol: FBLN1
FBLN1
0.010 GeneticVariation disease BEFREE Using homozygosity mapping and exome sequencing, we discovered a missense mutation, p.(Cys397Phe), in fibulin-1 in three patients from a consanguineous family presented with a novel syndrome of syndactyly, undescended testes, delayed motor milestones, mental retardation and signs of brain atrophy. 24084572 2014
Entrez Id: 3077
Gene Symbol: HFE
HFE
0.010 GeneticVariation disease BEFREE Two imaging approaches were applied to evaluate the effect of HFE genetic variation on brain atrophy, namely voxel-based morphometry and region of interest-based probabilistic approach (SPM8; Wellcome Trust Centre for Neuroimaging). 26613252 2016
Entrez Id: 406913
Gene Symbol: MIR126
MIR126
0.010 Biomarker disease BEFREE Transferring microRNA-126 into a mouse middle cerebral artery occlusion model via lentivirus, we found that microRNA-126 overexpression increased the number of CD31<sup>+</sup>/BrdU<sup>+</sup> (5-bromo-2'-deoxyuridine-positive) proliferating endothelial cells and DCX<sup>+</sup>/BrdU<sup>+</sup> neuroblasts in the ischemic mouse brain, improved neurobehavioral outcomes (p < 0.05), and reduced brain atrophy volume (p < 0.05) compared with control mice. 30825669 2019
Entrez Id: 54664
Gene Symbol: TMEM106B
TMEM106B
0.120 GeneticVariation disease BEFREE Together, these results indicate that brain atrophy in presymptomatic carriers of common frontotemporal dementia mutations is affected by both genetic and environmental factors such that TMEM106B enhances the benefit of cognitive reserve on brain structure. 28460069 2017
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE To test the hypothesis that the e4 allele of APOE is associated with a region-specific pattern of brain atrophy in AD. 10563634 1999
Entrez Id: 551
Gene Symbol: AVP
AVP
0.010 Biomarker disease BEFREE To investigate whether genetic polymorphism of alcohol-metabolizing enzymes [including alcohol dehydrogenase (ADH) and aldehyde dehydrogenase (ALDH)] was related to alcoholic brain atrophy, we determined restriction fragment-length polymorphisms of the ADH2 and ALDH2 genes in 77 male alcoholics. 8659684 1996
Entrez Id: 10327
Gene Symbol: AKR1A1
AKR1A1
0.020 Biomarker disease BEFREE To investigate whether genetic polymorphism of alcohol-metabolizing enzymes [including alcohol dehydrogenase (ADH) and aldehyde dehydrogenase (ALDH)] was related to alcoholic brain atrophy, we determined restriction fragment-length polymorphisms of the ADH2 and ALDH2 genes in 77 male alcoholics. 8659684 1996
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.020 GeneticVariation disease BEFREE To investigate whether genetic polymorphism of TNF was related to alcoholic brain atrophy, we determined restriction fragment-length polymorphisms of the TNF-beta genes in 72 male alcoholics. 11410733 2001
Entrez Id: 5663
Gene Symbol: PSEN1
PSEN1
0.130 GeneticVariation disease BEFREE To investigate whether a similar pattern of cortical atrophy is present in presymptomatic presenilin 1 E280A mutation carriers an average of 6 years before clinical symptom onset. 23134660 2013
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE To investigate a possible relationship between the genetic variants of APOE and brain atrophy in patients with AD. 11673590 2001
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE To evaluate the longitudinal influence of family history (FH) of Alzheimer disease (AD) and apolipoprotein E ε4 allele (APOE4) on brain atrophy and cognitive decline over 4 years among asymptomatic middle-aged individuals. 22592366 2012
Entrez Id: 4747
Gene Symbol: NEFL
NEFL
0.050 Biomarker disease BEFREE To determine the association of serum neurofilament light chain (NfL) with functional deterioration and brain atrophy during follow-up of patients with behavioral variant frontotemporal dementia (bvFTD). 30209235 2018
Entrez Id: 945
Gene Symbol: CD33
CD33
0.010 Biomarker disease BEFREE Thus, we investigated the influence of CD33 genotypes on AD-related brain atrophy to clarify the possible means by which CD33 impacts AD. 26803496 2017
Entrez Id: 274
Gene Symbol: BIN1
BIN1
0.020 Biomarker disease BEFREE This study supported that BIN1 contributes to the risk of AD by altering neural degeneration (abnormal tau, brain atrophy and glucose metabolism) but not Aβ pathology. 27003210 2016
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.040 Biomarker disease BEFREE This short report clarifies the heterogeneity of structural magnetic resonance imaging (MRI) findings in seven demented patients due to pathologically accumulated TAR DNA-binding protein-43 (TDP-43) protein using visual analyses including visual rating scales (i.e., global cortical atrophy and medial temporal atrophy scales). 31520153 2019
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.060 Biomarker disease BEFREE This may be due to complex partial volume effects of CSF in BOLD signal in patients with brain atrophy. 28119587 2016